How to enhance the Image Quality
(Image scanned) Know How

3 Steps to get a Confocal Image
How to enhance the Image Quality
Scanning with Mercury Lamp
LSM Abbreviations
LSM Glossary
1. "More signal!"
  • Change to longer pixel dwell times by reducing scanning speed
  • Use "Average" method: Calculation of "Sum" or "Mean" value of pixels of consecutive "Line" or "Frame" scans.
  • Increase bandwidth of emission filter (e.g. LP instead of BP).
  • Enlarge pinhole diameter;
    Note: optical slice thickness increases accordingly.
  • Increase excitation energy (laser power); But: pay attention to bleaching, saturation and phototoxic effects.
2. "More details!"
  • Use objective with higher numerical aperture (NA);
    x/y-resolution ~ 1/NA, z-resolution ~ 1/NA2.
  • Increase "FrameSize"= number of pixels per line + lines per frame, e.g. 1024 x 1024 or 2048 x 2048 (min. 4 x 1).
  • Optimize scan zoom (Z), i.e. pixel size < or = 0.25 x diameter of Airy disk
    (e.g.: M = 40x, NA 1.3, l= 488 nm => Z = 6).
  • Increase dynamic range (change from 8 to 12 bit per pixel).
3. "More reliability!"
  • Use Multitracking: very fast switching of excitation wavelengths;
    prevents crosstalk of signals between channels;
    predefined configurations available.
  • Use ROI (Region Of Interest) function: significantly reduces excited area of specimen and increases acquisition rate at constant SNR;
    several ROls of any shape can be defined and used simultaneously.
LP:Long pass
BP:Band pass
NA:Numerical aperture
ROI:Region of Interest
SNR:Signal-to-Noise Ratio