Sample courtesy of Udo Onwubiko, University of North Carolina, Chapel Hill
Accelerate your speed to results

Powerful, Versatile, Scalable

ZEISS Microscopy Image Analysis Software Solutions

Are you getting the insights you need from your image analysis software? As your lab and data grow, will your current tools evolve with you? Accelerate your time to results, incorporate AI, and tackle new challenges with the ZEISS arivis portfolio. Our tools are designed to support your journey regardless of what instrumentation you use: ZEISS or another brand, confocal, lightsheet, high content, high throughput, EM and more!

 

  • Flexible Tools & Operators

    Seamlessly build one-click pipelines.

  • Rich AI Availability

    Pretrained, customizable, open-source (integrated Cellpose), or DIY.

  • Big data-friendly

    Capable of importing most file formats.

  • Scales Effortlessly

    Analyze 2D, 3D, and 4D datasets of virtually any size.

  • Reproducible, Quantitative Results

    Standardize analysis across datasets and teams with repeatable pipelines.

  • Seamless Integration & Collaboration

    Connect cloud, desktop, and high-throughput environments to share data, models, and workflows.

Flexible, Scalable Workflows to Get the Answers You Need

At ZEISS, we provide a comprehensive range of software solutions for microscopy image analysis. Our portfolio covers everything from basic measurements to advanced assays, and all options can be integrated with AI technology if desired. With our user-friendly tools, defining your analysis task and identifying what you want to discover is now within reach.
  • Instance segmentation of Fluo.cells. using arivis Cloud.
    Sample courtesy of Julia Mack, PI at UCLA Mack lab

    Cell Biology

    Examining cells in culture, microorganisms, model organisms or whole mammalian systems, we can help you study static and dynamic processes such as:

    • Morphology and structure
    • Differentiation and development
    • Interactions with surroundings
    • Tracking particles and structures
    • Effects of drugs or treatments
    • Subcellular localization
    • Gene expression
  • Large submaxillary gland cancer tumours, processed with expansion microscopy and visualised on the lightfield4D. Samples are stained with markers against cytoskeletal components, with DNa labelled with hoechst33342.
    Sanple courtesy of Aroshini Nugawela, Department of Biomedical and Life Sciences, Lancaster University, UK.

    Cancer Research

    Build on the basic cell biology component when studying spheroids, tumeroids, or organoids, zenografts or model systems to analyze:

    • Tumor growth and metastasis
    • Tumor microenvironment
    • Spatial organization of cells in tumors or organoids
    • Proliferation rates
    • Protein expression levels and distribution
  • ReNcell CX neuronal stem cells; stains: GFAP (green), DAPI (nuclei), MitoTracker CMX (mitochondria, red), Phalloidin (cytoskeleton, magenta).  Protocol for NSC differentiation; impact of metabolic stress on NSC fate/identity & mitochondrial dynamics.   image used for single‑cell analysis of mitochondrial networks.
    Sample courtesy of Caitlyn Mahony, University of Cape Town, Western Cape South Africa

    Neuroscience

    From whole cleared tissue to slices or neuronal cultures, learn more about:

    • Tracing Neuronal Pathways
    • Mapping Connections
    • Morphology and structure of dendrites, axons, synapses, spines, and more
    • Distribution of proteins and cellular structures in brain tissue
  • CIVM -complex in-vitro  models, organoids and spherpoids. 3D images of organoids visualized and analysed using arivis.  2D Brightfield images and 3D organoids were acquired with CD7 with LSM
    Sample courtesy of Dr. Martin Engle, Invetia Life Sciences.

    Biotech/Pharma

    Scalable solutions in your field of research with arivis Hub:

    • Leverage analysis performed on a single data set to run bulk parallelized processing
    • Register and browse image collections, experiments, and results from anywhere
    • Manage access for users and groups
    • Import and archive original datasets
    • Flexible pricing for throughput bursts
    • Increase efficiency with scalable computation

Discover Image Analysis Possibilities with ZEISS