AUTOMATED SOLUTIONS

ZEISS Guided Workflows

Integrated into your existing infrastructure.

Automate repetitive, manual microscopy workflows through one-click imaging, AI-assisted analysis, expert review, and structured results so your team can focus on what matters.

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See how it works

THE CHALLENGE

Overcoming workflow inefficiencies.

An integrated stack that turns images into reliable, repeatable, scalable, and ready-reviewed results.

Customize workflows

Build tailored workflows that fit into the tools you already use.
Increase sensitivity

Systematic, exhaustive search helps you detect more.
Boost consistency

Standardized workflows across operators and sites.
Accelerate decisions

Prioritized evidence gets you to confident results faster.
Generate insights

Traceable data and reporting, ready for downstream analysis.
Improve productivity

Work more efficiently while reducing costs.

The workflows

One connected path from sample to result.

ZEISS connects sample intake, automated imaging, AI-assisted candidate detection, targeted verification, evidence generation and review/reporting into a configurable sample-to-result workflow. ZEISS connects sample intake, automated imaging, AI-assisted candidate detection, targeted verification, evidence generation, and review/reporting into a configurable sample-to-result workflow. Select a hotspot to learn more about our workflows.

THE CUSTOMIZED SOLUTION

Built to work as one.

Integrated into your existing workflow turning images into reliable, repeatable, and scalable results.

Automated imaging

Automated systems capture large sample areas with consistent, repeatable acquisition — Axioscan 7, CD7, and fit-for-purpose capture.

ZEISS SlideStream software_monitor screen

Workflow automation linked to your LIMS/LIS

SlideStream standardize acquisition, sample handling, and barcode-linked execution.

AI analysis

Detect, classify, and prioritize rare events with configurable image-analysis pipelines and a browser-based review UI.

Operational expenses
Test throughput
Return on investment

"before" schematic demonstrating manual screening across fragmented, disconnected systems.

"After" schematic demonstrating one traceable, sample-to-report workflow.

The ZEISS co-development approach.

ZEISS replaces manual screening and disconnected tools — imaging, analysis, review, and reporting in separate systems — with one traceable, sample-to-report workflow: automated imaging, AI detection, expert review, and structured results, built with you and professionalized to scale.

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USE CASES

One platform. Many applications.

Tell us about your workflow and we'll help identify opportunities to improve throughput and efficiency.

Spatial biology & phenotype analysis

Example markets:

High-plex tissue phenotyping, Biopharma and translational research, etc.
S. Frölich, Research Centre of Infectious Diseases | University of Adelaide | Australia

Histology & Cytology

Example markets:

Human translational research (toxicology), Veterinary diagnostics, Food (safety), Marine (microplastics), etc.
Michal Skruzny | ZEISS Microscopy GmbH

Fungal species detection

Example markets:

Air quality, Agriculture (crop disease), Food (alternative meat), Beverages (brewing & vinting), etc.
P. Denner | German Center of Neurodegenerative Diseases (DZNE) | Bonn, Germany

Drug Screening & MoA analysis

Example Markets:

BioPharma R&D (Oncology, Inflammation, Neurodegenerative diseases, Infectious diseases).
Toxicology & safety screening

Example Markets:

BioPharma Pre-Clinical Development

EXAMPLE USE CASE

Spatial Biology workflow

One connected workflow for spatial biology — from multiplex staining to review-ready reports. ZEISS Guided Workflows bring imaging, orchestration and AI analysis into a single traceable path, so your team can profile more samples with less hands-on setup.